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Perl/BIOPerl

Online Resources

BioPerl - The community Wiki site

Learning Perl

Beginning Perl for Bioinformatics (James Tisdall) - A clear guide for learning the basics of Perl, with relevant examples for biologists. Highly recommended.

Mastering Perl for Bioinformatics (James Tisdall) - The next in the series, which introduces object-oriented programming.

Perl Pocket Reference [PDF] (John Vromans) - A concise reference for Perl. Not specific to biology, but nonetheless helpful to have around.

Arpy's Scripts

I've been writing Perl scripts to parse and organize the nascent Mimulus genome build. I'll start to put these up with explanations. Hopefully they'll be of some use!